29.05 - SUNDAY

30.05 - MONDAY

31.05 - TUESDAY

01.06 - WEDNESDAY

8:00 – 9:15

BREAKFAST (8:00 – 9:30)

9:15 – 9:30

L101 (9:15 – 10:00) Weontae Lee

Non-Thermal Plasma and Protein Folding.

L201 (9:15 – 10:00) Victor Muñoz

Experimental Studies of Fast-Folding Proteins: Lessons about Free Energy Barriers and Pre-Exponential Factors in Protein Folding.

L301 (9:30 – 10:15) Keehyoung Joo

Protein Structure Determination by Global Optimization

Using Sparse and Ambiguous NMR restraints.

L401 (9:30 – 10:15) Haiguang Liu

Revealing structures and dynamics of proteins using the X-ray lasers: from a computational perspective.

9:30 – 9:45

9:45 – 10:00

10:00 – 10:15

L102 (10:00 – 10:45) Koliński Andrzej

Efficient Modeling of Protein Structure and Dynamics.

L202 (10:00 – 10:45) Maciej Kozak

The order-disorder processes in solution SAXS studies of the protein folding.

L302 (10:15 – 11:00) Igor Konieczny

Homology Modeling, Molecular Synamics, Biochemistry and Mass Spectrometry for Deescription of Nucleoprotein Complex of DNA Replication Initiator.

L402 (10:15 – 11:00) Martin Zacharias

Exploring biomolecular dynamics and interactions using enhanced sampling approaches.

10:15 – 10:30

10:30 – 10:45

L102 (10:45 – 11:00) Agnieszka Lipska

Molecular dynamics of protein A and a WW domain with
a united-residue model including hydrodynamic interaction.

L203 (10:45 – 11:00) Qianyi Cheng

Folding Mechanisms of Small Proteins GB1 and LB1.

10:45 – 11:00

11:00 – 11:30

COFFEE (11:00 – 11:30)

11:30 – 11:45

L103 (11:30 – 12:15) Jooyoung Lee

Protein Structure Prediction/Determination by Global Optimization.

L204 (11:30 – 12:15) Masaki Sasai

Dynamical Energy Landscape Perspective of Protein Functioning.

L303 (11:30 – 12:00)
Sylwia RodziewiczMotowidło

Structural studies of the HVEM protein and its fragments interacting with BTLA and CD160 proteins.

L403 (11:30 – 12:15) Changbong Hyeon

Contact statistics highlight distinct organizing principles

of RNA and proteins.

11:45 – 12:00

12:00 – 12:15

12:15 – 12:30

L104 (12:15 – 12:45) Yi He

Correlations of the structure - dynamics – function of structurally homologous CheY-like proteins.

L205 (12:15 – 12:45) Stanisław Ołdziej

Foldons, Protein Folding Nucleation Sites.

L304 (12:00 – 12:45) Joanna Skórko-Glonek

Regulation of the Proteolytic Activity of the HtrA (DegP) Protease from Escherichia Coli; Role of the Regulatory Loops.

L404 (12:15 – 13:00) Antti Niemi

Solution X-ray scattering (S/WAXS) and the formation of large scale structure in protein dynamics.

12:30 – 12:45

12:45 – 13:00

L105 (12:45 – 13:00) Balachandran Manavalan

Support –vector-machine-based protein single-model quality assessment.

L206 (12:45 – 13:00) Marta Wiśniewska

Buried Water Molecules in Protein Kinases.

LUNCH 12:50 – 13:25

(FOR MALBORK PARTICIPANTS)

CLOSING REMARKS

13:00 – 14:00

LUNCH (13:00 – 14:00)

14:00 – 14:15

L106 (14:00 – 14:45) Philippe Derreumaux

All-atom and coarse-grained simulations for protein structure prediction and protein aggregation dynamics and thermodynamics.

L207 (14:00 – 14:45) Joanna Sułkowska

Energy landscape of Supercoiled Protein Folding.

MALBORK (13:30 – 19:00)

 

14:15 – 14:30

14:30 – 14:45

14:45 – 15:00

L107 (14:45 – 15:00) InSuk Jung

Study of conformational diversity of GC-repeating ds-DNA.

L208 (14:45 – 15:15) Adam Sieradzan

Unique Features of Telomers.

15:00 – 15:15

L108 (15:00 – 15:15) Paweł Krupa

Role of disulfide bonds on folding and structures of proteins.

15:15 – 15:30

L109 (15:15 – 15:30) Seung Hwan Hong

A fragment search method for Dynamic Fragment Assembly.

L209 (15:15 – 15:45) Jarosław Marszałek

Evolutionary Dynamics of Protein - Protein interactions,
a Case Study of Proteins Involved in Iron - Sulfur Cluster Biogenesis.

15:30 – 15:45

COFFEE (15:30 – 16:00)

15:45 – 16:00

COFFEE (15:45 – 16:15)

16:00 – 16:15

L110 (16:00 – 16:45) Kunihiro Kuwajima

The problem of protein folding.

16:15 – 16:30

 

16:30 – 16:45

GDAŃSK

16:45 – 17:00

L111 (16:45 – 17:30) In-Ho Lee

Pathway Model of Mini-Protein BBA5.

17:00 – 17:15

17:15 – 17:30

17:30 – 17:45

L112 (17:30 – 17:45) Magdalena Mozolewska

Mechanism of Fe/S cluster transfer.

17:45 – 18:30

 

18:30 – 19:30

POSTER SESION (18:30 – 19:30)

19:30 – 20:00

CONFERENCE BANQET

19:00 – 20:00

SUPPER in the Hotel

 

GDAŃSK

20:00 – 21:00

SUPPER in the Hotel

20:00 – 22:00